So, I have a piece of my side protector off while I am waiting for new clips. We have had a good bit of rain lately and I'm sure a little (if not more) water has gotten through the holes. Should I be worried about this or is there some place where it may seep out? I just don't want Mr. Rust to start creeping into my girl. And, so far, I haven't heard any sloshing..

 

Nah,be more worried about around rear hinges (and sunroof drains if an si) IIRC,teh doors do have lil drains @ bottom of pinch weld.Check the FAQ-it lists all of the leak prone areas of our cars...