i have a 1999 4 door civic
i just did a 5speed swap to my d16y7 with a standard tranny from a ex ek
swap went really smooth no big/major problems installing

but

when my auto tranny blew my speedometer went out
1.i replace with 5 speed tranny and different speed sensor and speedometer still does not work

2.now my car smokes hella much from the engine but i think it might be just **** burning off

3.i dont know if its cause im si ecu but my car revs at 2000 and when i barley touch the gas it bogs like crazy but if keep giving gas it runs just fine

4.when im about to switch gears the car kinda hesitates and then shifts

5.all of my lights dim out real bad

6.and when i have my blinker on my car rpms jump to the beat of the blinker

any help or suggestions on wtf is going wrong